NAVRAJ
SIKAND

Research Software Engineer

Building computational infrastructure for DNA nanotechnology and developing machine learning models for molecular design at Arizona State University.

01

About Me

I'm a Computer Science student at Arizona State University and Research Software Engineer at the Biodesign Institute's Šulc Group.

My work sits at the intersection of machine learning, biophysics, and software engineering. I architect computational infrastructure that powers DNA nanotechnology research for a global community of scientists.

From deploying HPC clusters to developing SE(3) diffusion models for molecular dynamics, I build tools that democratize access to cutting-edge computational research.

4.0
GPA at ASU
20+
Lab Members Supported
150+
Weekly Active Users
02

Selected Work

Infrastructure

HPC Cluster Deployment

Linux
Slurm
Networking
System Admin

Managed procurement and deployment of a 3-server HPC cluster supporting international research community.

  • Deployed 200+ core computing infrastructure
  • Configured authentication and monitoring systems
  • Supporting 150+ weekly user registrations
  • Enabled scalable research computation access
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Web Platform

Nanobase Platform

Next.js
React
IndexedDB
Fuse.js

Complete modernization of DNA nanotechnology research database platform.

  • Reduced page load by 80% (12.7MB → 2.6MB)
  • Implemented sub-10ms typo-tolerant search
  • Achieved 3× user growth in one month
  • Eliminated server dependency for search queries
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Backend API

UnitedCore

TypeScript
Express.js
PostgreSQL
Prisma

Unified authentication and data backend for cross-platform research workflows.

  • Centralized authentication for multiple applications
  • Type-safe REST API with schema validation
  • Eliminated data inconsistencies across platforms
  • Serving 150+ active weekly researchers
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3D Visualization

oxView

Three.js
JavaScript
WebGL
IndexedDB

3D DNA/RNA molecular design platform with version control capabilities.

  • Implemented Git-style commit history and branching
  • Added local-first storage architecture
  • Created shareable permalink system
  • Integrated with oxCloud for simulation submission
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03

Technical Expertise

Core Programming

C++ & Systems Programming
Python & Scientific Computing
Rust
SQL & Database Design
Bash Scripting
Git Version Control

Web Development

TypeScript/JavaScript
Next.js & React
Node.js & Express
Three.js & WebGL
RESTful API Design
Modern CSS & Tailwind

Infrastructure

HPC Cluster Management
Linux System Administration
Docker & Containerization
CI/CD (GitHub Actions)
GPU Scheduling (NVIDIA MPS)
Network Configuration

AI/ML

RAG Pipelines
Local LLM Deployment

Let's Build Something

Open to research collaborations and interesting projects